Metataxonomic

Primers and Sequencer Selection

OTUs or ASVs Calling

Metagenome Prediction

Diversity Index

Identification of Biomarkers

Whole-Metagenome

Selection of Sequencing Platform

Taxonomic Classification

De novo assembly

Strain Identification

Functional Annotation

Identification of Biomarkers

Metatranscriptomics

Taxonomic Classification

Pathways Analysis

Integration with Host Traits

Co-occurrence Analysis

Weighted Correlation Analysis